计算中心

　　中心打破院系壁垒、学科壁垒、课题组壁垒，创新性的将不同品牌、不同架构、不同年代、不同CPU、不同网络、不同存储的设备融合为一套高性能计算集群，统一管理资源共享。

  • 计算：Asus, Dell, Gigabyte, H3C, HPE, Huawei, IBM, Inspur, Intel, Lenovo, Sugon, Supermicro
  • 存储：DDN, Dell, HPE, Huawei, IBM, Inspur, WDC
  • 网络：BNT, Brocade, Cisco, Dell, Fortinet, H3C, Hillstone, Huawei, Intel, Mellanox, Ruckus, Voltaire
  • CPU：Intel Xeon 5150, E5430, X5550, X7542, E5620, E5645, X5650, E5-2643, E5-2660, E5-2692v2, E5-2680v3, E5-2630v4, E5-2640v4, E5-2650v4, E5-2660v4, E5-2680v4, E5-2682v4, E7-4850v4, Gold 6140, Gold 6148, Gold 6248, Platinum 9242, Gold 5220R, Gold 6226R. AMD EPYC 7302P, 7702
  • GPU：Nvidia Tesla K40, P100, V100(PCIe), V100(SXM2), GeForce RTX 2080 Ti, TITAN RTX
  • NET：1/10/40Gb Ethernet, 10Gb iWARP Ethernet, 20/40/56/100Gb InfiniBand, 100Gb Omni-Path Architecture

 

集群总体架构如下

architecture


地址：江苏省南京市鼓楼区金银街15号唐仲英楼

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  1. 计算资源服务
    高性能计算中心计算存储资源须要付费使用，基本收费标准如下：

    1. CPU机时：按照用户作业占用的CPU核*小时收费，独占作业按照占用节点的所有CPU核收费，排队时间不收费。
       
      队列 用户类型 元/核/小时
      e5645 x5650 x5650ib 校内及协同创新中心用户 0.025
      校外教育及科研用户 0.05
      非学术用户 0.10
      x7542 e52643tgb e52660tgb
      e52660ib e52692v2ib e52680v3ib
      e5v3ib e52630v4 e52640v4
      e52650v4 e52680v4ib e52682v4opa
      7702opa 5220r      		 校内及协同创新中心用户 0.05
      校外教育及科研用户 0.10
      非学术用户 0.20
      6140ib 9242opa 6226rib 校内及协同创新中心用户 0.06
      校外教育及科研用户 0.12
      非学术用户 0.24
      e7v4ib 校内及协同创新中心用户 0.10
      校外教育及科研用户 0.20
      非学术用户 0.40


    2. 加速卡机时：按照用户作业占用的加速卡*小时收费，CPU核按照占用节点加速卡的比例分配。为便于计算，加速卡费用平摊到CPU核统一计费，独占作业按照占用节点的所有CPU核收费，排队时间不计算费用。

      队列 用户类型 元/卡/小时 元/核/小时
      e5v3k40ib队列：
      2*Intel Xeon E5-2680v3
      2*NVIDIA Tesla K40 12GB
      128GB RAM
      56Gb FDR InfiniBand      		 校内及协同创新中心用户 1.20 0.1
      校外教育及科研用户 2.40 0.2
      非学术用户 4.80 0.4
      e5v4p100ib队列：
      2*Intel Xeon E5-2660v4
      2*NVIDIA Tesla P100 PCIe 16GB
      128GB RAM
      56Gb FDR InfiniBand      		 校内及协同创新中心用户 1.68 0.12
      校外教育及科研用户 3.36 0.24
      非学术用户 6.72 0.48
      6148v100ib队列：
      2*Intel Xeon Gold 6148
      NVIDIA Tesla V100 PCIe 16GB
      192GB RAM
      56Gb FDR InfiniBand      		 校内及协同创新中心用户 3.6 0.09
      校外教育及科研用户 7.2 0.18
      非学术用户 14.4 0.36
      62v100ib队列：
      2*Intel Xeon Gold 6248
      8*NVIDIA Tesla V100 SXM2 32GB
      768GB RAM
      100Gb EDR InfiniBand      		 校内及协同创新中心用户 3 0.6
      校外教育及科研用户 6 1.2
      非学术用户 12 2.4
      722080ti队列：
      AMD EPYC 7302P
      4*NVIDIA GeForce RTX 2080 Ti 11GB
      128GB RAM
      100Gb Omni-Path Architecture      		 校内及协同创新中心用户 1.2 0.3
      校外教育及科研用户 2.4 0.6
      非学术用户 4.8 1.2
      72rtx队列：
      AMD EPYC 7302P
      4*NVIDIA TITAN RTX 24GB
      128GB RAM
      100Gb Omni-Path Architecture      		 校内及协同创新中心用户 1.8 0.45
      校外教育及科研用户 3.6 0.9
      非学术用户 7.2 1.8


    3. 文件系统存储空间：按照用户申请的空间配额收费，每个组免费提供1TiB空间。

      用户类型 元/GiB/天 元/TiB/年
      校内及协同创新中心用户 0.00161 ≈600
      校外教育及科研用户 0.00321 ≈1200
      非学术用户 0.00642 ≈2400


    4. 云盘存储空间：按照用户申请的空间配额收费，每个用户免费提供200GB空间。

      用户类型 元/GB/天 元/TB/年
      校内及协同创新中心用户 0.00110 ≈400
      校外教育及科研用户 0.00219 ≈800
      非学术用户 0.00438 ≈1600


  2. 设备托管服务
    用户自行负责软硬件维护，将设备放置在本中心机房，本中心收取托管费用。

    1. 基本收费
      根据用户托管设备占用的空间和功耗进行收费，以下为典型设备的参考价格。

      类型 元/月
      双路CPU计算节点（≤400W） 150/台 或 150/U 按较高者收取
      四路CPU计算节点（≤800W） 300/台 或 150/U 按较高者收取
      GPGPU、Xeon Phi等加速卡（≤200W） 75/块
      配套设备（存储、交换机等） 75/U


    2. 超限系数
      当机房内完整的空机柜不足20%时，以课题组为单位根据占用机柜数量按系数倍数收费；机房内空机柜大于20%时，本系数均按1计算。

      机柜数量 系数
      1 1
      2 1.25
      3 1.75
      4 2.5


    3. 时间系数
      从设备安装开始，按照使用年限系数倍数收费。

      年限 系数
      ≤5年 1
      6年 1.3
      7年 1.6
      ≥8年 1.9


    4. 共享
      托管用户根据不同共享类型，按系数倍数收费。共享资源给其他用户使用的，可收取计算资源服务费，收取的费用冲抵托管费用，具体收费标准参考本中心计算资源使用费，可由本中心和托管用户协商决定。

      类型 系数
      独享使用 1
      统一管理共享使用 0.8


  3. 其它
    对一些特殊情况和用户，由双方协商决定。
    本办法由人工微结构科学与技术协同创新中心高性能计算中心负责解释执行。


人工微结构科学与技术协同创新中心
高性能计算中心 

论文奖励

正式发表的论文符合以下要求

  1. 第一单位为“南京大学”
  2. 作者单位中有“人工微结构科学与技术协同创新中心（Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing 210093, China）”
  3. 作者中有计算中心服务人员或文章中致谢“人工微结构科学与技术协同创新中心高性能计算中心（High-Performance Computing Center of Collaborative Innovation Center of Advanced Microstructures）”
  4. 各类新闻宣传、公众号文章中致谢“人工微结构科学与技术协同创新中心高性能计算中心”

同时满足上述四项要求的按照以下标准（期刊列表）进行奖励，不足四项的酌情奖励：

  1. 顶级期刊（CELL、NATURE、SCIENCE）奖励十万元计算费
  2. 一流期刊（Nature子刊、PNAS、PRL、PRX、JACS、ANGEW、影响因子大于20的期刊）奖励一万元计算费
  3. npj Quantum Materials 奖励五千元计算费
  4. SCI A区奖励一千元计算费
  5. SCI B区奖励五百元计算费

　　为推动科研回归学术初心，破除“唯论文”和“SCI至上”的顽瘴痼疾，中心将改变现有奖励减免与论文期刊直接挂钩的方法，建立科学的综合评价体系。在新的奖励减免政策发布前，现有政策仍有效且继续奖励，新政策仍会要求成果中须标注和致谢本中心。

集群测试

　　征得同意，用户进行编译、优化、测试等工作产生的计算费予以减免，对于编写测试报告的用户视情况给予额外的计算费奖励。

顶级期刊

  • CELL
  • NATURE
  • SCIENCE

一流期刊

  • NATURE BIOTECHNOLOGY
  • NATURE CELL BIOLOGY
  • NATURE CHEMICAL BIOLOGY
  • NATURE CHEMISTRY
  • NATURE CLIMATE CHANGE
  • NATURE COMMUNICATIONS
  • NATURE DIGEST
  • NATURE GENETICS
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  • NATURE IMMUNOLOGY
  • NATURE MATERIALS
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  • NATURE METHODS
  • NATURE NANOTECHNOLOGY
  • NATURE NEUROSCIENCE
  • NATURE PHOTONICS
  • NATURE PHYSICS
  • NATURE REVIEWS CANCER
  • NATURE REVIEWS CARDIOLOGY
  • NATURE REVIEWS CLINICAL ONCOLOGY
  • NATURE REVIEWS DRUG DISCOVERY
  • NATURE REVIEWS ENDOCRINOLOGY
  • NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY
  • NATURE REVIEWS GENETICS
  • NATURE REVIEWS IMMUNOLOGY
  • NATURE REVIEWS MICROBIOLOGY
  • NATURE REVIEWS MOLECULAR CELL BIOLOGY
  • NATURE REVIEWS NEPHROLOGY
  • NATURE REVIEWS NEUROLOGY
  • NATURE REVIEWS NEUROSCIENCE
  • NATURE REVIEWS RHEUMATOLOGY
  • NATURE REVIEWS UROLOGY
  • NATURE STRUCTURAL & MOLECULAR BIOLOGY
  • ACCOUNTS OF CHEMICAL RESEARCH
  • ADVANCES IN PHYSICS
  • ANNUAL REVIEW OF ASTRONOMY AND ASTROPHYSICS
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  • ANNUAL REVIEW OF IMMUNOLOGY
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  • IEEE ENG MED BIOL
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  • LIVING REVIEWS IN RELATIVITY
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  • PROGRESS IN MATERIALS SCIENCE
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  • REVIEWS OF MODERN PHYSICS
  • ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
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  • PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

npj QM

  • npj Quantum Materials

SCI A区

  • AAPG BULLETIN
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  • IEEE TRANSACTIONS CIRCUITS AND SYSTEMS-I
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  • IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
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  • IMMUNITY
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  • Journal of Climate
  • JOURNAL OF CLINICAL INVESTIGATION
  • JOURNAL OF CLINICAL ONCOLOGY
  • JOURNAL OF CONTROLLED RELEASE
  • JOURNAL OF COSMOLOGY AND ASTROPARTICLE PHYSICS
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  • JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH
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  • JOURNAL OF NEUROSCIENCE
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  • JOURNAL OF ORGANIC CHEMISTRY
  • JOURNAL OF PEDIATRICS
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  • JOURNAL OF THE AMERICAN MATHEMATICAL SOCIETY
  • JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
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  • JOURNAL OF VIROLOGY
  • KIDNEY INTERNATIONAL
  • LASER PHOTONICS REVIEW
  • LEUKEMIA
  • LIVING REVIEWS IN SOLAR PHYSICS
  • MACROMOLECULES
  • MANAGEMENT SCIENCE
  • MARINE GEOLOGY
  • MATERIALS CHARACTERIZATION
  • MATERIALS SCIENCE AND ENGINEERING: REPORTS
  • MATHEMATICAL PROGRAMMING
  • MEMOIRS OF THE AMERICAN MATHEMATICAL SOCIETY
  • MOLECULAR CELL
  • MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY
  • NANO LETTERS
  • NANOTOXICOLOGY
  • NEURON
  • NEW JOURNAL OF PHYSICS
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  • OPERATIONS RESEARCH
  • OPHTHALMOLOGY
  • OPTICS EXPRESS
  • OPTICS LETTERS
  • ORE GEOLOGY REVIEW
  • ORGANIC LETTERS
  • PAIN
  • PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY
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  • PHYSICAL REVIEW A
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  • PLANT CELL
  • PLANT JOURNAL
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  • PLOS BIOLOGY
  • PROCEEDINGS OF THE LONDON MATHEMATICAL SOCIETY
  • PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
  • QUATERNARY SCIENCE REVIEWS
  • RADIOLOGY
  • REMOTE SENSING OF ENVIRONMENT
  • RENEWABLE AND SUSTAINABLE ENERGY REVIEWS
  • SCIENTIFIC REPORTS
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  • SOFT MATTER
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  • SPACE SCIENCE REVIEWS
  • SPINE JOURNAL
  • STROKE
  • TECTONICS
  • THE ASTRONOMICAL JOURNAL
  • THE ASTROPHYSICAL JOURNAL
  • THE ASTROPHYSICAL JOURNAL LETTERS
  • THE ASTROPHYSICAL JOURNAL SUPPLEMENT SERIES
  • TOXICOLOGICAL SCIENCE
  • TRANSPORTATION RESEARCH PART B: METHODOLOGICAL
  • TRANSPORTATION SCIENCE
  • WATER RESEARCH
  • WATER RESOURCE RESEARCH

SCI B区

  • ACM Transactions on Knowledge Discovery from Data
  • ACM Transactions on Mathematical Software
  • ACS CATALYSIS
  • ACTA BIOMATERIALIA
  • ADVANCE IN WATER RESOURCES
  • ADVANCED SYNTHESIS AND CATALYSIS
  • AGRICUTURAL WATER MANAGEMENT
  • AGRICUTURE ECOSYSTEMS & ENVIRONMENT
  • ALLERGY
  • AMERICAN JOURNAL OF EPIDEMIOLOGY
  • AMERICAN JOURNAL OF GASTROENTEROLOGY
  • AMERICAN JOURNAL OF KIDNEY DISEASES
  • AMERICAN JOURNAL OF OPHTHALMOLOGY
  • AMERICAN JOURNAL OF PATHOLOGY
  • AMERICAN JOURNAL OF PHYSIOLOGY-RENAL PHYSIOLOGY
  • AMERICAN JOURNAL OF PUBLIC HEALTH
  • AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
  • AMERICAN JOURNAL OF SURGERY
  • ANAESTHESIA
  • ANALYST
  • ANALYTICA CHIMICA ACTA
  • ANESTHESIOLOGY
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为了加强高性能计算中心机房的管理，保障机房的正常有效运行，特制定本条例。

  1. 严格遵守国家、学校、实验室和协同创新中心的规章制度。不得利用机房内的计算机从事危害国家安全、泄露国家秘密等违法犯罪活动。
  2. 爱护机房内的一切设施，保证机房内的清洁、卫生，自觉维护设备的安全运行。出现设备故障，应及时向机房管理人员报告，做好故障登记记录，并积极排除设备故障。
  3. 不得使用任何手段窃听或盗取网络上数据、数据流等电子信息。
  4. 放入机房的计算机需符合机房供电、散热、风道等要求。
  5. 计算机进入机房，需由PI提出申请填写相应表格，经机房管理小组批准后，按照分配的位置安装摆放计算机接插线缆。
  6. PI可指定专人为设备负责人，机房管理小组关于该PI设备的事宜将与设备负责人联系确认。
  7. 计算机等设备机架位置、电源位置、网络等线缆位置、接口位置、IP地址等配置由机房管理小组统一分配，不得擅自更改。
  8. 未经许可不得改动机房内设备的位置（包括电源、线缆和接口等）和设置；不得以任何形式中止和干扰机房的正常运行（如切断电源供应、阻断线缆等行为）。
  9. 为了更有效地管理及应用机房设备，对机房内所有设备进行编号并登记注册，不得破坏、变造或移动设备上的标签。
  10. 机房内的计算机均需由中心统一管理，中心将在尽量保证PI组使用的情况下，空闲资源对中心开放共享。
  11. 本中心无法确保数据安全，用户需自行备份数据，保证数据安全。
  12. 计算机设备更新换代迅速，机房内空间、供电和散热能力已趋于饱和，中心将定期对老旧设备进行清理，以便部署最新的计算设备。
  13. 出入机房实行登记制度，需在登记表上如实进行登记，保证机房内清洁卫生，离开机房时请关闭灯和门。
  14. 进入机房进行维护，需注意个人安全，防止触电、听力损伤等，只可对本PI组计算机进行操作，不得触动其他计算机和公用设备。
  15. 由设备负责人对本PI组计算机访问INTERNET负责。
  16. 任何机房内计算机如影响机房的正常运行（如病毒影响网络运行，电源故障影响配电系统等），机房管理小组均有权先行中断网络或电力连接再通知相关负责人处理。
  17. 未尽事宜由机房管理小组负责解释。